The detailed information of tRNA gene sequence


Sequence ID>W2012033297
Genome IDVHPH01000002
Search identical group
Phylum/ClassBacillota
SpeciesWeissella paramesenteroides DmW_115116 [VHPH]
Start position on genome 174861
End posion on genome 174773
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
taattgtgat
tRNA gene sequence 
GGAGCTATGGCAGAGTGGTAATGCAGCGGACTCGAAATCCGCCGAACCGGTGTCGAACCG
GCGCACGGGTTCAAATCCCGTTGGCTCCTttt
Downstream region at tRNA end position 
taggttttgt
Secondary structure (Cloverleaf model)
>W2012033297	Ser	CGA
                   t      Tttt taggttttgt
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     T + G
                     A - T          T A
                    T     T G C C C     A
        G A        G      | | | | |     A
      T     G A C G       A C G G G     C
      G       | | |                 T T
      G     A T G C
        T A        A     CGAACCGGTGTCGAACCGGCGC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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