The detailed information of tRNA gene sequence


Sequence ID>W2012036525
Genome IDVIAE01000008
Search identical group
Phylum/ClassMycoplasmatota
SpeciesCandidatus Phytoplasma pini MDPP [VIAE]
Start position on genome 25244
End posion on genome 25318
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aataatttta
tRNA gene sequence 
GGGGATATGATGTTAATGGTAGCATAACGGTCTCCAAAACCGCTTGTTTGGGTTCGAATC
CTAATATCCCTGCCA
Downstream region at tRNA end position 
ttataataac
Secondary structure (Cloverleaf model)
>W2012036525	Trp	CCA
                   a      GCCA ttataataac
                     G + T
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          T A
                    T     A A T C C     A
      A A T        G      | | + | |     G
    T       T G T A       T T G G G     C
    G       + | | |                 T T
    G       G C A T
      T A          A     TTGT
                    A   C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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