The detailed information of tRNA gene sequence


Sequence ID>W2012037003
Genome IDVICE01000133
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesLysobacter aestuarii JCM 31130 [VICE]
Start position on genome 9393
End posion on genome 9301
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttggtgtcgc
tRNA gene sequence 
GGAGAGTTGCCCGAGTGGCTGAAGGGGCTCCCCTGCTAAGGGAGTATAGGGTTTATAGCT
CTATCGAGGGTTCGAATCCCTCACTCTCCGCCA
Downstream region at tRNA end position 
gttccatatc
Secondary structure (Cloverleaf model)
>W2012037003	Ser	GCT
                   c      GCCA gttccatatc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C C       G A G G G     C
    G         | | |                 T T
    C       A G G G
      T G A        G     TATAGGGTTTATAGCTCTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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