The detailed information of tRNA gene sequence


Sequence ID>W2012037121
Genome IDVICH01000009
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAliiroseovarius halocynthiae MA1-10 [VICH]
Start position on genome 11738
End posion on genome 11663
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
caacatgtgg
tRNA gene sequence 
GCCGCTGTAGCTCAGCTGGTAGAGCACGTCATTCGTAATGATGGGGTCGTAGGTTCAAGT
CCTATCAGCGGCACCA
Downstream region at tRNA end position 
ctacaatttg
Secondary structure (Cloverleaf model)
>W2012037121	Thr	CGT
                   g      ACCA ctacaatttg
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     T A T C C     A
      C G A        A      + | | | |     A
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    G + T
                    T - A
                    C - G
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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