The detailed information of tRNA gene sequence


Sequence ID>W2012037757
Genome IDVIFM01000136
Search identical group
Phylum/ClassMyxococcota
SpeciesMyxococcus sp. AM401 [VIFM]
Start position on genome 5863
End posion on genome 5765
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aatcggccac
tRNA gene sequence 
GGTAGGGCCTCCGGACCTGGTGGCCGGCCTGGGCTTCAAACCCAGTGAGAGGCGTTGAGA
GACGTCTCTGGCGAGTTCGATTCTCGTGCTCTACCGCCA
Downstream region at tRNA end position 
tgtatccctt
Secondary structure (Cloverleaf model)
>W2012037757	SeC	TCA
                   c      GCCA tgtatccctt
                     G - C
                     G - C
                     T - A
                     A - T
                     G - C
                     G + T
                     G - C
                     C - G          T T
                    C     T G C T C     A
      C C A        T      + | | | |     G
    T       G G C C       G C G A G     C
    G       | | | |                 T T
    G       C C G G
      T G G        C     TGAGAGGCGTTGAGAGACGTCTCTG
                    C - G
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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