The detailed information of tRNA gene sequence


Sequence ID>W2012039605
Genome IDVILC01000113
Search identical group
Phylum/ClassCyanobacteriota
SpeciesAphanizomenon sp. UHCC 0183 [VILC]
Start position on genome 7633
End posion on genome 7719
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
agtttatgtT
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGTTGATGGTGACGCACTCGAAATGCGTTTTGGGGAAACTCAAC
GGGGGTTCAAATCCCCCCCTCTCCGTtg
Downstream region at tRNA end position 
aatttatgtt
Secondary structure (Cloverleaf model)
>W2012039605	Ser	CGA
                   T      GTtg aatttatgtt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     A
    G       G C C T       G G G G G     C
    G       + | |                   T T
    T       T G G T
      T G A        G     TTTGGGGAAACTCAAC
                    A - T
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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