The detailed information of tRNA gene sequence


Sequence ID>W2012039938
Genome IDVINQ01000002
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAquicoccus porphyridii L1 8-17 [VINQ]
Start position on genome 161969
End posion on genome 161894
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
cctcaccggc
tRNA gene sequence 
GCCCCTATAGCTCAGCTGGTAGAGCAACTGATTTGTAATCAGTAGGTCCGCGGTTCGAGT
CCGTGTGGGGGCACCA
Downstream region at tRNA end position 
gtaagccaaa
Secondary structure (Cloverleaf model)
>W2012039938	Thr	TGT
                   c      ACCA gtaagccaaa
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     G T G C C     A
      C G A        A      | + | | |     G
    T       C T C G       C G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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