The detailed information of tRNA gene sequence


Sequence ID>W2012041260
Genome IDVIRF01000072
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesNovosphingobium sp. BW1 [VIRF]
Start position on genome 6340
End posion on genome 6264
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
cctgatgtgc
tRNA gene sequence 
GCGCCCGTAGCTCAGCTGGATAGAGCACGAGCCTTCTAAGCTTGGGGTCGCAGGTTCGAA
CCCTGCCGGGCGCGCCA
Downstream region at tRNA end position 
tttccctgtc
Secondary structure (Cloverleaf model)
>W2012041260	Arg	TCT
                   c      GCCA tttccctgtc
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          C A
                    T     C G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTC
                    C - G
                    G + T
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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