The detailed information of tRNA gene sequence


Sequence ID>SRA1051194
Genome IDSRR035096.106020
Search identical group
Phylum/Class454 Sequencing (SRP001817)
Species
Start position on genome 368
End posion on genome 278
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ataaatacat
tRNA gene sequence 
AGAAGTGTACTCAAATTGGTAAAGAGGGCAGTTTGCTAAACTGTTAGGCCGGTTAATAAC
TGGTGCGGGGTTCGAACCCCTCCATTTCTGCtt
Downstream region at tRNA end position 
atttttaaat
Secondary structure (Cloverleaf model)
>SRA1051194	Ser	GCT
                   t      GCtt atttttaaat
                     A - T
                     G - C
                     A - T
                     A - T
                     G + T
                     T - A
                     G - C          C A
                    T     C T C C C     A
      T A A        A        + | | |     G
    T       A C T C       C G G G G     C
    G         | | |                 T T
    G       A G A G
      T A A        G     TAGGCCGGTTAATAACTGGTG
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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