The detailed information of tRNA gene sequence


Sequence ID>W2012042351
Genome IDVISF01000001
Search identical group
Phylum/ClassDeferribacterota
SpeciesSeleniivibrio woodruffii S4 [VISF]
Start position on genome 525192
End posion on genome 525287
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gaatggaacc
tRNA gene sequence 
GGGGGTGTGTGGGGTACTGGTGTCCCCTGCGGTCTTCAAAACCGATGGTGACGCACCTGT
GCGTCAGGCGGGTTCGATTCCCGTGCACCTCCGCCA
Downstream region at tRNA end position 
aaatatttta
Secondary structure (Cloverleaf model)
>W2012042351	SeC	TCA
                   c      GCCA aaatatttta
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T - A
                     G - C
                     T + G          T T
                    G     T G C C C     A
      C A T        T      + | | | |     G
    T       G G G G       G C G G G     C
    G       | | | |                 T T
    G       C C C C
      T G T        T     TGGTGACGCACCTGTGCGTCAG
                    G   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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