The detailed information of tRNA gene sequence


Sequence ID>W2012043870
Genome IDVITH01000029
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAzospirillum brasilense BR 11650 [VITH]
Start position on genome 9671
End posion on genome 9587
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
cagtgaggaT
tRNA gene sequence 
GCGGGGGTGGTGAAATTGGTAGACGCGCCGGACTCAAAATCCGGTTCTGCAAGGAGTGTC
GGTTCGAGTCCGACCGCCCGCATCa
Downstream region at tRNA end position 
aggccgggtt
Secondary structure (Cloverleaf model)
>W2012043870	Leu	CAA
                   T      ATCa aggccgggtt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G   G
                     G - C          T G
                    T     C A G C C     A
      T A A        G      | | | | |     G
    T       A G T G       G T C G G     C
    G         | + |                 T T
    G       A C G C
      T A G        G     TTCTGCAAGGAGT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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