The detailed information of tRNA gene sequence


Sequence ID>W2012044154
Genome IDVITN01000003
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesNitrospirillum amazonense BR 11880 [VITN]
Start position on genome 235278
End posion on genome 235202
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
ccgccccggc
tRNA gene sequence 
GTCTCCGTAGCTCAGCAGGATAGAGCACAGGATTCCTAATCCTGGGGCCGTGGGTTCGAA
TCCCGCCGGGGACACCA
Downstream region at tRNA end position 
tttcccacac
Secondary structure (Cloverleaf model)
>W2012044154	Arg	CCT
                   c      ACCA tttcccacac
                     G - C
                     T - A
                     C - G
                     T + G
                     C - G
                     C - G
                     G - C          T A
                    T     C G C C C     A
      C G A        A      | + | | |     G
    A       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGCC
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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