The detailed information of tRNA gene sequence


Sequence ID>SRA1051233
Genome IDSRR035096.114549
Search identical group
Phylum/Class454 Sequencing (SRP001817)
Species
Start position on genome 278
End posion on genome 351
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
caccccatga
tRNA gene sequence 
GGCGAGTGGGCAGGTAGGTTATGCAGCGGATTGCAAATCCGTGTAGAGCGGTTCGATTCC
GCTACTCGCCTCCA
Downstream region at tRNA end position 
caatatcttg
Secondary structure (Cloverleaf model)
>SRA1051233	Cys	GCA
                   a      TCCA caatatcttg
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     T - A          T T
                    G     T C G C C     A
        T G        G      | | | | |     G
      A     G A C G       A G C G G     C
      G       | | |                 T T
      G     A T G C
        T T        A     GTAG
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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