The detailed information of tRNA gene sequence


Sequence ID>W2012047915
Genome IDVIWB01000020
Search identical group
Phylum/ClassBacillota
SpeciesBacillus thuringiensis 1230 [VIWB]
Start position on genome 1199
End posion on genome 1109
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ggagccatac
tRNA gene sequence 
AGAGAAGTACCCAAGTGGCTCAAGGGGCTCCCCTGCTAAGGGAGTAGATCGCTAACGCGG
TGCGAGGGTTCGAATCCCTTCTTCTCTGCCA
Downstream region at tRNA end position 
tacatattgg
Secondary structure (Cloverleaf model)
>W2012047915	Ser	GCT
                   c      GCCA tacatattgg
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     T T C C C     A
      T G A        A      + | | | |     G
    G       A C C C       G A G G G     C
    G         | | |                 T T
    C       A G G G
      T C A        G     TAGATCGCTAACGCGGTGC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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