The detailed information of tRNA gene sequence


Sequence ID>W2012049581
Genome IDVIYF01000029
Search identical group
Phylum/ClassChloroflexota
SpeciesKallotenue sp. CFH 73958 [VIYF]
Start position on genome 54458
End posion on genome 54554
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gcatcctgat
tRNA gene sequence 
GGGAGCGGATGTTGGCCGGTGCCGGTCGCCGTCTTCAAAACGGTTGGGCGGGGTGACGAG
CCTCGCCGGTGGGTTCGACTCCCACACGCTCCCGCCA
Downstream region at tRNA end position 
gccgcgcttg
Secondary structure (Cloverleaf model)
>W2012049581	SeC	TCA
                   t      GCCA gccgcgcttg
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G   A          T C
                    A     C A C C C     A
      C C G        T      | | | | |     G
    G       G T T G       G T G G G     C
    G       | + + +                 T T
    T       C G G T
      G C          C     TGGGCGGGGTGACGAGCCTCGCCG
                    G + T
                    C - G
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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