The detailed information of tRNA gene sequence


Sequence ID>W2012049596
Genome IDVIYF01000059
Search identical group
Phylum/ClassChloroflexota
SpeciesKallotenue sp. CFH 73958 [VIYF]
Start position on genome 8940
End posion on genome 9030
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
actatgtccc
tRNA gene sequence 
cGGAATGCGTGGGCCTGGTGGCCCGGCCGGTCTTCAAAACCGGTTTGCGGGCGCTGGCGC
GTCCGTGGCGGTTCGATTCCCCCGCATTCCGCtcc
Downstream region at tRNA end position 
ttcgagcggt
Secondary structure (Cloverleaf model)
>W2012049596	SeC	TCA
                   c      Ctcc ttcgagcggt
                     c - G
                     G - C
                     G - C
                     A - T
                     A - T
                     T - A
                     G - C
                     C - G          T T
                    G     C C C C C     A
        T C        T      | |   | |     G
      G     C G G G       G G C G G     C
      G       | |                   T T
      T     C C C G
        G G        G     TTTGCGGGCGCTGGCGCGTCCGT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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