The detailed information of tRNA gene sequence


Sequence ID>W2012049614
Genome IDVIYF01000103
Search identical group
Phylum/ClassChloroflexota
SpeciesKallotenue sp. CFH 73958 [VIYF]
Start position on genome 14153
End posion on genome 14080
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
agccgggcag
tRNA gene sequence 
AGGGCAGTAGCTCAGTTGGTAGAGCAGCGGTCTCCAAAACCGCAGGTCGGGGGTTCGAGT
CCCTCCTGCCCTGCtc
Downstream region at tRNA end position 
cgtaggtaga
Secondary structure (Cloverleaf model)
>W2012049614	Trp	CCA
                   g      GCtc cgtaggtaga
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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