The detailed information of tRNA gene sequence


Sequence ID>SRA1051450
Genome IDSRR035098.3969
Search identical group
Phylum/Class454 Sequencing (SRP001819)
Species
Start position on genome 54
End posion on genome 142
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aattataata
tRNA gene sequence 
GGAACGGTGGCTGAGTGGCCGAAGGCAACGGTTTGCTAAATCGTCGTACGCAGTAATGTG
TACCGTGAGTTCGAATCTCACCCGTTCCGnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1051450	Ser	GCT
                   a      Gnnn nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     A - T
                     C - G
                     G - C
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G T C G       G T G A G     C
    G         + | |                 T T
    C       A G G C
      C G A        A     CGTACGCAGTAATGTGTACC
                    A - T
                    C - G
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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