The detailed information of tRNA gene sequence


Sequence ID>W2012080909
Genome IDVLKB01000008
Search identical group
Phylum/ClassCyanobacteriota
SpeciesCalothrix desertica PCC 7102 [VLKB]
Start position on genome 196362
End posion on genome 196287
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
cctcaattaT
tRNA gene sequence 
CCCCCGATAGCTCAGATGGTAGTAGCGTCTGTTTGAAGCACAGAAGGTCGTCAGTTCGAT
TCTGACTTGGGGGGTtt
Downstream region at tRNA end position 
cgttgccctg
Secondary structure (Cloverleaf model)
>W2012080909	Phe	GAA
                   T      GTtt cgttgccctg
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     G + T
                     A - T          T T
                    T     C A G T C     A
      A G A        A      | | | | |     G
    T       C T C G       G T C A G     C
    G         | | |                 T T
    G       T A G C
      T A G        G     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    T - A
                  T       C
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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