The detailed information of tRNA gene sequence


Sequence ID>W2012080916
Genome IDVLKB01000008
Search identical group
Phylum/ClassCyanobacteriota
SpeciesCalothrix desertica PCC 7102 [VLKB]
Start position on genome 190920
End posion on genome 190836
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gactggtaaT
tRNA gene sequence 
GGAAGATACTGCTCACTGGAGGGCAACCAGCCTCGAAAACTGGAGCAGGGTAATACCTGG
GGGTTCGATGCCTCTATCTTCCGTtt
Downstream region at tRNA end position 
tgtaaaactt
Secondary structure (Cloverleaf model)
>W2012080916	Ser	CGA
                   T      GTtt tgtaaaactt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A          G T
                    A     T C T C C     A
      C A C        C      + | + | |     G
    T       T C G T       G G G G G     C
    G       + | | |                 T T
    G       G G C A
      A G          A     AGCAGGGTAATACCT
                    C - G
                    C - G
                    A - T
                    G - C
                    C   A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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