The detailed information of tRNA gene sequence


Sequence ID>W2012082383
Genome IDVLLC01000019
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesDesulfobotulus alkaliphilus ASO4-4 [VLLC]
Start position on genome 11854
End posion on genome 11778
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
cgcttgttgt
tRNA gene sequence 
CGGGAAGTGGCTCAGTCTGGTAGAGCACAGCGTTCGGGACGCTGGGGTCGCTGGTTCGAA
TCCAGTCTTCCCGACCA
Downstream region at tRNA end position 
gatttgcata
Secondary structure (Cloverleaf model)
>W2012082383	Pro	CGG
                   t      ACCA gatttgcata
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     T G A C C     A
      T G A        G      + | | | |     G
    C       C T C G       G C T G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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