The detailed information of tRNA gene sequence


Sequence ID>W2012082384
Genome IDVLLC01000021
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesDesulfobotulus alkaliphilus ASO4-4 [VLLC]
Start position on genome 10389
End posion on genome 10476
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
agccgttgct
tRNA gene sequence 
GGAGGAGTGGCCGAGTGGTTGAAGGCGGCGGTCTTGAAAACCGTTGGGTGTCACAGCCCC
GTGGGTTCGAATCCTACCTCCTCCGCCA
Downstream region at tRNA end position 
cgaagttata
Secondary structure (Cloverleaf model)
>W2012082384	Ser	TGA
                   t      GCCA cgaagttata
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | + | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TGGGTGTCACAGCCCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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