The detailed information of tRNA gene sequence


Sequence ID>SRA1051642
Genome IDSRR035098.45474
Search identical group
Phylum/Class454 Sequencing (SRP001819)
Species
Start position on genome 103
End posion on genome 190
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tcacttctag
tRNA gene sequence 
GGAGGATTCGCCTAGTGGCCTATGGCTTCCGTTTCGAAAACGGATTGGGCGAAAGCCCTC
GGGGGTTCGACTCCCTCATCCTCCGCAA
Downstream region at tRNA end position 
aatcgcccgg
Secondary structure (Cloverleaf model)
>SRA1051642	Ser	CGA
                   g      GCAA aatcgcccgg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T C
                    T     C T C C C     A
      T G A        C      | + | | |     G
    G       T C C G       G G G G G     C
    G         | | |                 T T
    C       T G G C
      C T A        T     TTGGGCGAAAGCCCTC
                    T - A
                    C - G
                    C - G
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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