The detailed information of tRNA gene sequence


Sequence ID>SRA1051713
Genome IDSRR035098.62932
Search identical group
Phylum/Class454 Sequencing (SRP001819)
Species
Start position on genome 292
End posion on genome 202
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaaataaaat
tRNA gene sequence 
AGAGGGTTACTCAAGTGGCTTAAGAGGATAACTTGGAAGGTTATTAGGTCGGTTAAACGA
CGCATGGGTTCAAATCCCATACCCTCTACCA
Downstream region at tRNA end position 
atggacatgt
Secondary structure (Cloverleaf model)
>SRA1051713	Ser	GGA
                   t      ACCA atggacatgt
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     T A C C C     A
      T G A        A      | | | | |     A
    G       A C T C       A T G G G     C
    G         | | |                 T T
    C       A G A G
      T T A        G     TAGGTCGGTTAAACGACGC
                    A - T
                    T - A
                    A - T
                    A - T
                    C - G
                  T       G
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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