The detailed information of tRNA gene sequence


Sequence ID>W2012093835
Genome IDVMSO01000002
Search identical group
Phylum/ClassBacillota
SpeciesRuminococcus sp. SW178 [VMSO]
Start position on genome 114152
End posion on genome 114078
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
tacgcagtaA
tRNA gene sequence 
GCTGTCTTGGCGCAGTCGGTAGCGCGTCGCCTTGGTAAGGCGGAGGTCGGGGGTTCAAGT
CCCCTAGACAGCTTta
Downstream region at tRNA end position 
tttttttgtc
Secondary structure (Cloverleaf model)
>W2012093835	Thr	GGT
                   A      TTta tttttttgtc
                     G - C
                     C - G
                     T - A
                     G - C
                     T - A
                     C - G
                     T - A          T G
                    T     T C C C C     A
      T G A        G      + | | | |     A
    C       C G C G       G G G G G     C
    G       | | | |                 T T
    G       G C G C
      T A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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