The detailed information of tRNA gene sequence


Sequence ID>W2012106075
Genome IDVOPH01000001
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesPseudooceanicola sp. CAU 1508 [VOPH]
Start position on genome 547759
End posion on genome 547835
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
acctccacgt
tRNA gene sequence 
CGGGCTATGGCGCAGTCTGGTAGCGCGTCCGTCTGGGGGACGGAAGGTCGTAGGTTCAAG
TCCTGCTAGCCCGACCA
Downstream region at tRNA end position 
aaaacacccc
Secondary structure (Cloverleaf model)
>W2012106075	Pro	GGG
                   t      ACCA aaaacacccc
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T          T G
                    T     C G T C C     A
      T G A        G      | + | | |     A
    C       C G C G       G T A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    T - A
                    C - G
                    C - G
                    G - C
                    T - A
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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