The detailed information of tRNA gene sequence


Sequence ID>W2012106206
Genome IDVOPX01000001
Search identical group
Phylum/ClassDeltaproteobacteria
SpeciesBradymonadales bacterium TMQ1 [VOPX]
Start position on genome 809005
End posion on genome 809088
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
cgcgaggctc
tRNA gene sequence 
GCCGGAGTGGCGGAATCGGTAGACGCGGCGGATTCAAAATCCGTTGATCGAGAGATCGTG
CGGGTTCAAGTCCCGCCTCCGGTAtca
Downstream region at tRNA end position 
tcatagaagc
Secondary structure (Cloverleaf model)
>W2012106206	Leu	CAA
                   c      Atca tcatagaagc
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C G C C C     A
      T A A        G      | | | | |     A
    C       G G C G       G C G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGATCGAGAGATCGT
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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