The detailed information of tRNA gene sequence


Sequence ID>SRA1052030
Genome IDSRR035098.127177
Search identical group
Phylum/Class454 Sequencing (SRP001819)
Species
Start position on genome 198
End posion on genome 110
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agagtgtatc
tRNA gene sequence 
GGAAGTGTGGCTGAGTGGTCTAAGGCAACGGTTTGCTAAATCGTCGGGTGGTTTATACTG
CCCCGTGAGTTCGAATCTCACCGTTTCCAtat
Downstream region at tRNA end position 
tgaagtatat
Secondary structure (Cloverleaf model)
>SRA1052030	Ser	GCT
                   c      Atat tgaagtatat
                     G - C
                     G - C
                     A - T
                     A - T
                     G + T
                     T + G
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G T C G       G T G A G     C
    G         + | |                 T T
    T       A G G C
      C T A        A     CGGGTGGTTTATACTGCCCC
                    A - T
                    C - G
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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