The detailed information of tRNA gene sequence


Sequence ID>W2012123919
Genome IDVPFL01000003
Search identical group
Phylum/ClassHydrogenophilia
SpeciesHydrogenophilales bacterium SM250 [VPFL]
Start position on genome 136224
End posion on genome 136139
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
tttctttcgg
tRNA gene sequence 
GGAGGGGTTCCCGAGCGGTCAAAGGGGGCAGACTGTAAATCTGTTGGCTTAAGCCTTCGT
AGGTTCGAATCCTACCCCCTCCACCA
Downstream region at tRNA end position 
cgtcggatcg
Secondary structure (Cloverleaf model)
>W2012123919	Tyr	GTA
                   g      ACCA cgtcggatcg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A T C C     A
      C G A        T      | | | | |     G
    G       G C C C       G T A G G     C
    G         | | |                 T T
    T       A G G G
      C A A        G     TGGCTTAAGCCTTC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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