The detailed information of tRNA gene sequence


Sequence ID>W2012123924
Genome IDVPFL01000005
Search identical group
Phylum/ClassHydrogenophilia
SpeciesHydrogenophilales bacterium SM250 [VPFL]
Start position on genome 13410
End posion on genome 13486
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
aagcccccac
tRNA gene sequence 
GCGCCCGTAGCTCAGCTGGATAGAGTGTCGGCCTCCGGAGCCGAAGGTCGTGAGTTCGAA
TCTCGCCGGGCGCGCCA
Downstream region at tRNA end position 
tttttcctct
Secondary structure (Cloverleaf model)
>W2012123924	Arg	CCG
                   c      GCCA tttttcctct
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G C T C     A
      C G A        A      | + | | |     G
    T       C T C G       G T G A G     C
    G       | | | +                 T T
    G       G A G T
      A T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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