The detailed information of tRNA gene sequence


Sequence ID>W2012123925
Genome IDVPFL01000006
Search identical group
Phylum/ClassHydrogenophilia
SpeciesHydrogenophilales bacterium SM250 [VPFL]
Start position on genome 28343
End posion on genome 28268
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
tgtagacttc
tRNA gene sequence 
GCCCCGGTAGCTCAGTGGATAGAGCAGCCCCCTCCTAAGGGGCAGGTCGCACGTTCGATT
CGTGTTCGGGGCGCCA
Downstream region at tRNA end position 
gcgtcagccc
Secondary structure (Cloverleaf model)
>W2012123925	Arg	CCT
                   c      GCCA gcgtcagccc
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G + T          T T
                    T     T G T G C     A
      T G A        A      + | | | |     G
    G       C T C G       G C A C G     C
    G       | | | |                 T T
    A       G A G C
      T A          A     AGGTC
                    G - C
                    C - G
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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