The detailed information of tRNA gene sequence


Sequence ID>W2012123928
Genome IDVPFL01000008
Search identical group
Phylum/ClassHydrogenophilia
SpeciesHydrogenophilales bacterium SM250 [VPFL]
Start position on genome 56249
End posion on genome 56173
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
acagctgaaa
tRNA gene sequence 
CGGGGTGTAGCTCAGCCTGGTAGAGTACTGCGTTCGGGACGCAGGTGTCGGAGGTTCGAA
TCCTCTCACCCCGACCA
Downstream region at tRNA end position 
tttccttctc
Secondary structure (Cloverleaf model)
>W2012123928	Pro	CGG
                   a      ACCA tttccttctc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       C T C G       G G A G G     C
    T       | | | +                 T T
    G       G A G T
      G T A        A     GTGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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