The detailed information of tRNA gene sequence


Sequence ID>W2012123935
Genome IDVPFL01000012
Search identical group
Phylum/ClassHydrogenophilia
SpeciesHydrogenophilales bacterium SM250 [VPFL]
Start position on genome 78782
End posion on genome 78707
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cgcacgcagc
tRNA gene sequence 
GGGTCGGTAGCTCAACTGGCAGAGCGCCGGTCTCCAAAACCGGAGGTTGGGGGTTCGAAT
CCCTCCCGATCTGCCA
Downstream region at tRNA end position 
ttaaaccaac
Secondary structure (Cloverleaf model)
>W2012123935	Trp	CCA
                   c      GCCA ttaaaccaac
                     G + T
                     G - C
                     G + T
                     T - A
                     C - G
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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