The detailed information of tRNA gene sequence


Sequence ID>W2012126929
Genome IDVRVA01000036
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesMethylobacterium sp. WL64 [VRVA]
Start position on genome 6428
End posion on genome 6519
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccagagcgcc
tRNA gene sequence 
GGAGACGTGGCCGAGCGGCTGAAGGCACTCGTTTGCTAAATGAGCATACCCCGAAAGGGG
TATCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
ccacactaaa
Secondary structure (Cloverleaf model)
>W2012126929	Ser	GCT
                   c      GCCA ccacactaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     CATACCCCGAAAGGGGTATC
                    C - G
                    T - A
                    C - G
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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