The detailed information of tRNA gene sequence


Sequence ID>SRA1052090
Genome IDSRR035098.139276
Search identical group
Phylum/Class454 Sequencing (SRP001819)
Species
Start position on genome 498
End posion on genome 411
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGACGATGGCGCAGCACTGGAAATGCTGTATAGGGGCAACTCTA
TCGAGGGTTCGAATCCCTCCCTACTCCGta
Downstream region at tRNA end position 
gttcatcaaa
Secondary structure (Cloverleaf model)
>SRA1052090	Ser	GGA
                   n      CGta gttcatcaaa
                     G - C
                     G + T
                     A   C
                     G   A
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G       + | | |                 T T
    A       T G G C
      C G A        G     TATAGGGGCAACTCTATC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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