The detailed information of tRNA gene sequence


Sequence ID>SRA1052143
Genome IDSRR035098.148867
Search identical group
Phylum/Class454 Sequencing (SRP001819)
Species
Start position on genome 83
End posion on genome 170
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aattacagac
tRNA gene sequence 
GGAGGGCTGTCCGAGCGGCCGATGGAGCTAGTCTTGAAAACTAGTGGGCAGAAATGTCTC
GCGGGTTCGAATCCCGCGCCCTCCGCCA
Downstream region at tRNA end position 
cctgcaggcc
Secondary structure (Cloverleaf model)
>SRA1052143	Ser	TGA
                   c      GCCA cctgcaggcc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G C G G G     C
    G       + | | |                 T T
    C       T G G A
      C G A        G     TGGGCAGAAATGTCTC
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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