The detailed information of tRNA gene sequence


Sequence ID>W2012143749
Genome IDVTSR01000007
Search identical group
Phylum/ClassPlanctomycetota
SpeciesGimesia sp. JC646 [VTSR]
Start position on genome 243788
End posion on genome 243860
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ttacaattac
tRNA gene sequence 
GCCCCGTTCGTCTAATGGCCAGGATACCGATCTCTCATGTCGGAGACGCTGGGTTCAATT
CCCGCACGGGGTAttt
Downstream region at tRNA end position 
caaaaacaga
Secondary structure (Cloverleaf model)
>W2012143749	Glu	CTC
                   c      Attt caaaaacaga
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T T
                    T     C G C C C     A
      T A A        C        + | | |     A
    G       T C T G       C T G G G     C
    G       + | | +                 T T
    C       G G A T
      C A          A     AGACG
                    C - G
                    C - G
                    G - C
                    A - T
                    T + G
                  C       T
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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