The detailed information of tRNA gene sequence


Sequence ID>W2012143759
Genome IDVTSR01000013
Search identical group
Phylum/ClassPlanctomycetota
SpeciesGimesia sp. JC646 [VTSR]
Start position on genome 39400
End posion on genome 39327
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
aaccaaattc
tRNA gene sequence 
GGGGCCGTAGCTCAATCGGTTAGAGCAGCAAACTCATAATTTGTTGGTTACAGGTTCGAG
TCCTGTCGGCCCTAttt
Downstream region at tRNA end position 
tttgttcaga
Secondary structure (Cloverleaf model)
>W2012143759	Ile2	CAT
                   c      Attt tttgttcaga
                     G + T
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T G
                    T     T G T C C     A
      T A A        A      | | | | |     G
    C       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTT
                    G + T
                    C - G
                    A - T
                    A - T
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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