The detailed information of tRNA gene sequence


Sequence ID>W2012143763
Genome IDVTSR01000017
Search identical group
Phylum/ClassPlanctomycetota
SpeciesGimesia sp. JC646 [VTSR]
Start position on genome 183890
End posion on genome 183802
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ggtacagtca
tRNA gene sequence 
GGAGAGATGGCAGAGTGGCCGAATGCGCCGGTTTGCTAAACCGGTGAGCCGTGCAAACGG
TTCCACGGGTTCGAATCCCGTTCTCTCCGtat
Downstream region at tRNA end position 
tcaaaataat
Secondary structure (Cloverleaf model)
>W2012143763	Ser	GCT
                   a      Gtat tcaaaataat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     T G C C C     A
      T G A        G      | | | | |     G
    G       G A C G       A C G G G     C
    G         | | |                 T T
    C       A T G C
      C G A        G     TGAGCCGTGCAAACGGTTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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