The detailed information of tRNA gene sequence


Sequence ID>W2012154179
Genome IDVUMD01000017
Search identical group
Phylum/ClassBacillota
SpeciesClostridium sp. WCA-389-WT-23D1 [VUMD]
Start position on genome 80127
End posion on genome 80216
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ctgcgttttt
tRNA gene sequence 
GGAGATGTACCCAAGAGGCTGTAAGGGAGCGGTTTCGAAAACCGCCAGGCTGGAAGACCG
GCACCTGGGTTCGAATCCCAGCGTCTCCGCtc
Downstream region at tRNA end position 
attaaacaga
Secondary structure (Cloverleaf model)
>W2012154179	Ser	CGA
                   t      GCtc attaaacaga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     T + G
                     G - C          T A
                    T     G A C C C     A
    G A G A        A      | | | | |     G
  G         A C C C       C T G G G     C
  C           | | |                 T T
  T         A G G G
    G T A          A     CAGGCTGGAAGACCGGCAC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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