The detailed information of tRNA gene sequence


Sequence ID>W2012158197
Genome IDVVJM01000017
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesAkkermansia muciniphila BIOML-A18 [VVJM]
Start position on genome 1839
End posion on genome 1930
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cggcattaat
tRNA gene sequence 
GGAGCAGTACTCAAATGGCTAAGAGAGCAGTCTTGAAAACTGATAGGGCGTAGGGATACG
CTGTGTGGGTTCGAATCCTACCTGCTCCGCCA
Downstream region at tRNA end position 
tacggaaggt
Secondary structure (Cloverleaf model)
>W2012158197	Ser	TGA
                   t      GCCA tacggaaggt
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     A - T
                     G - C          T A
                    T     C A T C C     A
      T A A        A      | | + | |     G
    G       A C T C       G T G G G     C
    G         | | |                 T T
    C       A G A G
      T A          A     TAGGGCGTAGGGATACGCTGT
                    G   A
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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