The detailed information of tRNA gene sequence


Sequence ID>SRA1052496
Genome IDSRR035098.215024
Search identical group
Phylum/Class454 Sequencing (SRP001819)
Species
Start position on genome 102
End posion on genome 28
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cccctatatc
tRNA gene sequence 
TGCGGAATAAAGCAGCTTGGTTAGCTTACTAGGCTCATAACCTGGAAGACGTTGGTTCAA
ATCCAACTTCCGCAAtaa
Downstream region at tRNA end position 
aatgttctca
Secondary structure (Cloverleaf model)
>SRA1052496	Met	CAT
                   c      Ataa aatgttctca
                     T - A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     C A A C C     A
    T C G A        A      | | | | |     A
  T         C G A A       G T T G G     C
  G         | | | |                 T T
  G         G C T T
    T T A          A     AAGAC
                    C - G
                    T + G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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