The detailed information of tRNA gene sequence


Sequence ID>SRA1052610
Genome IDSRR035098.236861
Search identical group
Phylum/Class454 Sequencing (SRP001819)
Species
Start position on genome 294
End posion on genome 208
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ctctttttcg
tRNA gene sequence 
GGAGGGGTGTCTGAGCGGCCGAAGGAGCACGCTTGGAAAGCGTGTGTATGCGTAAGCGTA
CCGTGGGTTCGAATCCCACTCCCTCCGtgt
Downstream region at tRNA end position 
ttttcttaat
Secondary structure (Cloverleaf model)
>SRA1052610	Ser	GGA
                   g      Gtgt ttttcttaat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G T C T       G T G G G     C
    G         + | |                 T T
    C       A G G A
      C G A        G     TGTATGCGTAAGCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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