The detailed information of tRNA gene sequence


Sequence ID>SRA1052704
Genome IDSRR035098.255678
Search identical group
Phylum/Class454 Sequencing (SRP001819)
Species
Start position on genome 107
End posion on genome 179
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aattttctaa
tRNA gene sequence 
AACGGAATAGTTCAGTGGTTAGAACGTTGGAATCATAATCCAAATGCCAGGGGTTCAAAT
CTCCTTTTTGTTAtct
Downstream region at tRNA end position 
tataaatttt
Secondary structure (Cloverleaf model)
>SRA1052704	Met	CAT
                   a      Atct tataaatttt
                     A - T
                     A - T
                     C - G
                     G + T
                     G + T
                     A - T
                     A - T          T A
                    T     T C C T C     A
      T G A        A      | | | + |     A
    G       C T T G       A G G G G     C
    G       | | | |                 T T
    T       G A A C
      T A          G     ATGCC
                    T - A
                    T - A
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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