The detailed information of tRNA gene sequence


Sequence ID>SRA1052713
Genome IDSRR035098.256981
Search identical group
Phylum/Class454 Sequencing (SRP001819)
Species
Start position on genome 239
End posion on genome 150
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cctcatttca
tRNA gene sequence 
GGAGACGTCGCATAGTCCGGCCGAGTGCACCACCCTGCTAAGGTGGAGTTCCCTTTCGGG
AACCGAGGGTTCAAATCCCTCCGTCTCCGCtc
Downstream region at tRNA end position 
tgtcatctct
Secondary structure (Cloverleaf model)
>SRA1052713	Ser	GCT
                   a      GCtc tgtcatctct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
    C T G A        C      | | | | |     A
  C         T A C G       G A G G G     C
  G         + | | |                 T T
  G         G T G C
    C C G A        A     AGTTCCCTTTCGGGAACC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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