The detailed information of tRNA gene sequence


Sequence ID>SRA1052727
Genome IDSRR035098.262212
Search identical group
Phylum/Class454 Sequencing (SRP001819)
Species
Start position on genome 391
End posion on genome 306
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aaatcaatat
tRNA gene sequence 
GGAGAGATGGCAGAGTTGGTCGATTGCGTCTGATTTGAAATCAGATGAATCTCACGGTTC
CGAGGGTTCGAATCCCTCTCTCTCCTtaa
Downstream region at tRNA end position 
aataaaattt
Secondary structure (Cloverleaf model)
>SRA1052727	Ser	TGA
                   t      Ttaa aataaaattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     G
  G         G A C G       G A G G G     C
  G         + | | |                 T T
  T         T T G C
    C G A          G     TGAATCTCACGGTTCC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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