The detailed information of tRNA gene sequence


Sequence ID>W2012196116
Genome IDVWNB01000011
Search identical group
Phylum/ClassCandidatius Mariprofundia
SpeciesMariprofundus sp. KV [VWNB]
Start position on genome 66221
End posion on genome 66307
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
caattgcaat
tRNA gene sequence 
GCCTGAGTGGTGGAATTGGTAGACACCCGGGATTCAAAATCCCGTGCCTTCACGGGCGTG
CCGGTTCGACTCCGGCCTCAGGTACCA
Downstream region at tRNA end position 
gcaagcaact
Secondary structure (Cloverleaf model)
>W2012196116	Leu	CAA
                   t      ACCA gcaagcaact
                     G + T
                     C - G
                     C - G
                     T - A
                     G - C
                     A - T
                     G - C          T C
                    T     C G G C C     A
      T A A        G      | | | | |     G
    T       G G T G       G C C G G     C
    G         | | |                 T T
    G       A C A C
      T A G        C     TGCCTTCACGGGCGT
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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