The detailed information of tRNA gene sequence


Sequence ID>W2012196139
Genome IDVWNC01000002
Search identical group
Phylum/ClassCandidatius Mariprofundia
SpeciesMariprofundus sp. NF [VWNC]
Start position on genome 4145
End posion on genome 4069
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
gatctggcga
tRNA gene sequence 
GCGCCTGTAGCTCAATTGGATAGAGCAACAGCCTTCTAAGCTGTAGGCTGCAGGTTCGAG
CCCTGCCAGGCGCGCCA
Downstream region at tRNA end position 
cctgcaaaca
Secondary structure (Cloverleaf model)
>W2012196139	Arg	TCT
                   a      GCCA cctgcaaaca
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          C G
                    T     C G T C C     A
      T A A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGCT
                    A - T
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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