The detailed information of tRNA gene sequence


Sequence ID>W2012196144
Genome IDVWNC01000004
Search identical group
Phylum/ClassCandidatius Mariprofundia
SpeciesMariprofundus sp. NF [VWNC]
Start position on genome 112523
End posion on genome 112607
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
ggcgtgacat
tRNA gene sequence 
GGAGAGATTCCCGAGTGGCTAAAGGGGGCAGACTGTAAATCTGCTGGCTCAGCCTACGTT
GGTTCGAATCCAGCTCTCTCCACCA
Downstream region at tRNA end position 
gtttctgaag
Secondary structure (Cloverleaf model)
>W2012196144	Tyr	GTA
                   t      ACCA gtttctgaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C G A C C     A
      T G A        T      | + | | |     G
    G       G C C C       G T T G G     C
    G         | | |                 T T
    C       A G G G
      T A A        G     TGGCTCAGCCTAC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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