The detailed information of tRNA gene sequence


Sequence ID>W2012196146
Genome IDVWNC01000004
Search identical group
Phylum/ClassCandidatius Mariprofundia
SpeciesMariprofundus sp. NF [VWNC]
Start position on genome 112745
End posion on genome 112819
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
aatggatctg
tRNA gene sequence 
GCCCAGGTAGCTCAGGGGTAGAGCACATCCTTGGTAAGGATGAGGTCGCGAGTTCAATTC
TCGCTCTGGGCTCCA
Downstream region at tRNA end position 
gtttagatgg
Secondary structure (Cloverleaf model)
>W2012196146	Thr	GGT
                   g      TCCA gtttagatgg
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     G + T          T T
                    T     C G C T C     A
        G A        A      | | | | |     A
      G     C T C G       G C G A G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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